Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015876987.1_cds_XP_016436335.1_32206
CDS Infomation

[gene=LOC107762483] [db_xref=GeneID:107762483] [protein=serine carboxypeptidase-like 40] [protein_id=XP_016436335.1] [location=complement(join(24892..25044,25219..25324,25469..25561,26024..26142,26391..26645,28028..28302,28486..28593,29037..29427))] [gbkey=CDS]
Sequence

ATGGAGACATTGAAGACCACCACGTCTCTTCTTTTATTGACTCTCTTTCTTTCAAGCACT
AGTGTCACTCAAATCTTTGGAGTGAAGACACAAAGTGAAGCCCTTGGCCAATTTTACAAG
GCTAAGTTTAGACACAATTCCAACATTGACAAAAGCCATTTTACTCATGATCAAGATCTC
AAATATCTTCATAATAAAAAAACTGTACATGTGGTTTCTCAAAAAGAGAATGACAAGATT
CAGAAACTTCCTGGCCAACCTCCAGTAAGGTTTGAGCAGTATGGTGGATATGTTACAGTT
GATCAATCTGCTGGAAGAGCTTTCTATTATTACTTTGTTGAAGCTCAACGTTCTAACAAC
TCTTTGCCTCTTCTTCTTTGGCTTAATGGAGGTCCAGGATGTTCTTCTCTTGCATATGGA
GCCTTTCAAGAACTTGGACCATTTAGAGTAAACAGTGATGGCAAAACACTTCACAAAAAT
AAATTTGCATGGAACCATGCTGCCAATGTGTTATTCTTGGAGTCTCCAGCAGGAGTAGGT
TTTTCCTACTCTAACACATCATCTGATGTTAAGATTGGTGGAGATAGAAAAACAGCTAAA
GATAATTATAAGTTCTTAGTAAATTGGCTGGAAAGATTTCCTGAATACAAAGATAGAGAT
TTTTACATATCTGGAGAGAGTTATGCTGGTCATTATGTACCTCAATTGGCACATACCATT
CTATACCACAACAACAAGGCAAACAAGACTATCATTAATCTTAAAGGAATCTTGATTGGT
AATGCAGTGATTAATGATGAGACGGATACGAGAGGAATGTATGAATATTTTGCAAGTCAT
GCCCTGATTTCTGATGAACTTGAAGCTCAAATCCAGAAACAATGCAAGTTCACAGAGAGT
TCAGAATCAGACGAGTGCAAATTGGCAGGAAGTAAAGCTGAATATAATACTGACCCCATT
GATATCTACAACATATACGCTCCACTCTGCCATAATACCAATCTCACTGCCAAGCCCAAG
AAGCCTTCTTTAGTGATCGATCCATGTAGTGACTATTACACAATTGCCTACATGAATAGG
CCTGATGTTCAGAATGCTCTCCATGCCAATGTCACCAACATTAAATATTCAAATTGGCAG
CCATGCAGTGATGTCCTAACAAATTGGACAGACAGCTCATCAACCGTTATTCCTCTTCTC
AGAGAGTTTATGGCAAATGGACTTCGAGTGTGGATATTCAGCGGTGACACTGATGGAAGA
GTGCCTGTTACTTCAACCAAGAATTCTATTAAGATAATGAAGCTTCCTATCAAAACTGCG
TGGCACCCCTGGTACCTCAGTGCAGAGGTTGGTGGATATACACAAGTATACAAAGGAGAT
ATGACATTTGCAACAGTACGAGGGGCAGGACATCAAGTACCAAGTTATGAAGCAGCTAGA
TCCCTTTCACTTGTCATGCATTTTCTTGCTGGAACTGACCTCCCCGATAAACACACTTAA

Peptide Sequence

PEP ID

XP_016436335.1
PEP Infomation

PREDICTED: serine carboxypeptidase-like 40 [Nicotiana tabacum]
Sequence

METLKTTTSLLLLTLFLSSTSVTQIFGVKTQSEALGQFYKAKFRHNSNIDKSHFTHDQDL
KYLHNKKTVHVVSQKENDKIQKLPGQPPVRFEQYGGYVTVDQSAGRAFYYYFVEAQRSNN
SLPLLLWLNGGPGCSSLAYGAFQELGPFRVNSDGKTLHKNKFAWNHAANVLFLESPAGVG
FSYSNTSSDVKIGGDRKTAKDNYKFLVNWLERFPEYKDRDFYISGESYAGHYVPQLAHTI
LYHNNKANKTIINLKGILIGNAVINDETDTRGMYEYFASHALISDELEAQIQKQCKFTES
SESDECKLAGSKAEYNTDPIDIYNIYAPLCHNTNLTAKPKKPSLVIDPCSDYYTIAYMNR
PDVQNALHANVTNIKYSNWQPCSDVLTNWTDSSSTVIPLLREFMANGLRVWIFSGDTDGR
VPVTSTKNSIKIMKLPIKTAWHPWYLSAEVGGYTQVYKGDMTFATVRGAGHQVPSYEAAR
SLSLVMHFLAGTDLPDKHT

Transcript Sequence

Gene sequence data has not been registered.